SlideJ on PLOS ONE

A paper describing our SlideJ plugin for processing digital slides using ImageJ has been published on PLOS ONE:

Della Mea V, Baroni GL, Pilutti D, Di Loreto C (2017) SlideJ: An ImageJ plugin for automated processing of whole slide images. PLoS ONE 12(7): e0180540.

The work was partially supported and funded by the EU FP7 program, AIDPATH project, grant number 612471.

SlideJ plugin available

SlideJ is an ImageJ plugin for processing digital slides (also known as virtual slides, WSI, etc). It has been developed by MITEL and is now available at Github and also on ImageJ.net.

Automated recognition of hotspots in Ki67 slides: paper online now

A paper on automated recognition of hotspots in which to evaluate Ki67 positivity has been just accepted and published online by Computerized Medical Imaging and Graphics:

David Pilutti, Vincenzo Della Mea, Enrico Pegolo, Francesco La Marra, Fulvio Antoniazzi, Carla Di Loreto. An adaptive positivity thresholding method for automated Ki67 hotspot detection (AKHoD) in breast cancer biopsies. Computerized Medical Imaging and Graphics, 2017, in press.

The work has been carried out with funding by the AIDPATH Marie Curie EU FP7 project, grant no.612471.

AKHOD

PollicIoT- Piattaforma di localizzazione persone con disturbi cognitivi e demenza

pollicIoTPollicIoT è un progetto finanziato dalla Regione Autonoma Friuli Venezia Giulia nell’ambito del POR FESR 2014-2020,attivita’ 1.3.b, che vuole rispondere in maniera efficace alle necessita’ di oltre
25 milioni di persone colpite dal morbo di Alzheimer in tutto il mondo,520.000 solo in Italia.
PollicIoT è l’assistente tecnologico che offre un sistema di controllo remoto che permette il monitoraggio del malato a distanza da parte della famiglia o del Care Giver.
La finalita’ di PollicIoT è quella di offrire
,in uno scenario di Smart Health Assisted Living, una soluzione completa dedicata all’assistenza dei malati di Alzheimer.
Grazie … Continue Reading

Recognising household activities with the smartphone: paper finally published.

A feasibility study on smartphone accelerometer-based recognition of household activities and influence of smartphone position.

Della Mea VQuattrin OParpinel M.

Abstract

BACKGROUND:

Obesity and physical inactivity are the most important risk factors for chronic diseases. The present study aimed at (i) developing and testing a method for classifying household activities based on a smartphone accelerometer; (ii) evaluating the influence of smartphone position; and (iii) evaluating the acceptability of wearing a smartphone for activity recognition.

METHODS:

An Android application was developed to record accelerometer data and calculate descriptive … Continue Reading

E’ stata fondata la SIBIM – Società Scientifica Italiana di Informatica Biomedica.

L’Italia ha di nuovo una società scientifica che si occupa di Informatica Medica: La SIBIM – Società Scientifica Italiana di Informatica Biomedica.

Nel febbraio del 2017 l’Assemblea generale dei soci ha confermato il Consiglio Direttivo stabilito alla fondazione, che risulta composto come segue:

  • Silvana Quaglini (Presidente)
  • Vincenzo Della Mea (Vicepresidente)
  • Lucia Sacchi (Segretaria)
  • Pierangelo Veltri (Tesoriere)
  • Riccardo Bellazzi
  • Carlo Combi
  • Mauro Giacomini
  • Stefania Montani
  • Paolo Terenziani

 

The Summer School on Digital Pathology in the press

Messaggero Veneto, 19 settembre 2016: La Summer School al Campus del CRO

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AIDPATH Summer School in Digital Pathology

SUMMER SCHOOL ON DIGITAL PATHOLOGY
CRO Aviano, 12-16 September 2016

This is the 2nd summer school of a series of activities including networking, workshops, summer schools and short courses designed within the European AIDPATH project ‘Academia and Industry Collaboration for Digital Pathology’ (FP7-Marie Curie Action).

This School is organized by the University of Udine in collaboration with CRO, and with the unconditioned sponsorship of Roche.

Programme

  • Introduction to Digital Pathology
  • The digital slide workflow
  • Technical aspects
  • Image analysis
  • Novel imaging techniques

Audience

The foreseen audience is constituted by 10-30 participants holding one of the following positions:

  • Medical doctors (pathologists, haematologists),
  • Laboratory technicians (Pathology Lab),
  • Biotechnologists, biologists
  • Clinical engineers, Health informaticians (with health information systems knowledge)
  • Researchers … Continue Reading

AIDPATH Workshop at ECDP 2016, Berlin

European Congress on Digital Pathology, Berlin, 24-28 May 2016

AIDPATH Workshop on Digital Immunohistochemistry
25th May 2016

1130-1230 AIDPATH private managemenaidpatht meeting

13-15 AIDPATH workshop: Digital Immunohistochemistry

  • The AIDPATH project (Gloria Bueno, UCLM)
  • Quality assurance of image analysis tools (A.Rasmusson, VPC)
  •  On Ki67 hotspots (V.Della Mea, D.Pilutti, UNIUD)
  • AIDPATH Contests and Surveys (M.Garcia Rojo and G.Bueno)

Open discussion

AIDPATH Workshop at MIE2015

26th May 2015

Organisers: VUHSK, UNIUD, UCLM, SESCAM, SAS, TG
Place: Madrid, Spain
Workshop: Information Technology in Digital Pathology
2ndworkshop

Targeting academic and industry experts working in the field of Digital Pathology, this workshop will provide the opportunity to generate and discuss different analysis methods, case study examples and procedures. This will also allow the participants to fully understand the Information Technology (IT) techniques and image analysis tools that can be successfully applied to digital pathology. The topics cover different aspects related to The European Federation for Medical Informatics (EFMI)working groups, such as, MIP (Medical … Continue Reading